Crystals Software Project

CRYSTALS is a package for single crystal X-ray structure refinement and analysis. It also provides links to other widely used packages, including SUPERFLIP (Lucas Palatinus’s structure solution by charge flipping), MCE (a Fourier map and voids viewer by Rohlicek & Husak) both of which are distributed with CRYSTALS. There are links to PLATON for structure validation and for SQUEEZing disordered regions.

Features:

  • built-in guidance and validation using ‘The GUIDE’.
  • import and data reduction from many sources: SHELX/XPrep/WinGX format .ins/.hkl files, CAD4 .dat files, KappaCCD import.cif.
  • automatic hydrogen atom placement using combined geometric/difference Fourier placement.
  • interactive graphical model of the structure
  • sophisticated refinement with constraints and restraints
  • various reflection weighting schemes
  • graphical analysis of data, results and residuals
  • refinement of twinned data and discovery of unnoticed twin-laws using the ROTAX procedure
  • fourier maps and contour plots. Output to contour, MCE3D, MapView and ASCII formats.
  • Acta Cryst friendly CIFS and publication tables
  • colour thermal ellipsoid plots in Cameron. Output in WMF, postscript, encapsulated postscript, CHIME formats or print directly to a Windows printer.
  • powerful atomic and structural parameter editor
Oct 102012
 
Mr. William M. Brennan (2012-2013)

Will is working with Nick Rees, looking into the host/guest complexes of deoxycholic acid. Using variable temperature single crystal diffraction, along with Solid State NMR and Differential Scanning Calorimetry the project is particularly focused on phase changes within the crystal as a function of temperature. When not in the lab he enjoys long lunches, … Read the rest

Jan 062012
 
CRYSTALS v14.40

The CRYSTALS v14.40b installer is now available to download for the Windows platfom.

[Update: 14.40b fixes failure when importing reflections from Agilent cif_od files]

Selected highlights include:

  • New data import tools for most diffractometer types.
  • Asymmetric distance, Uij and adp vibration restraints.
  • Automatic lookup of neutron scattering factors.
  • Calculation of s.u’s on torsion angles in
  • Read the rest

Sep 132011
 
CRYSTALS Enhancements:  Absolute Structure Determination (A. L. Thompson and D. J. Watkin)

J. Appl. Cryst.  (2011), 44, 1017-1022.    [ doi:10.1107/S0021889811034066 ]

A summary of the features for investigating absolute structure available in the crystallographic refinement program CRYSTALS is presented, together with the results of analyses of 150 light-atom structures collected with molybdenum radiation carried out with these tools. The results confirm that the Flack and Hooft … Read the rest

May 122011
 
CRYSTALS v14.23

CRYSTALS v14.23c installer is available to download for the Windows platfom.

[Update - patched version 1423c released 27 May, fixes format problem with tiny weights in FCF, CIF input bug]

Selected highlights:

  • Added bond colouring to indicate either element type, or disordered part
  • Improved robustness of weighting scheme 17 (Shelx weights)
  • Output observation weights in
  • Read the rest

Apr 212011
 

CRYSTALS v14.21 installer is available to download for the Windows platfom.

Selected highlights:

  • Constraints (List 12), restraints (List 16) and manually omitted reflections (List 28) are appended to the CIF for easy reference.
  • Punch for list 1 is now possible.
  • Included slant 2Fo-Fc maps on the menu.
  • Fixed 2 bugs in #Perhydro: phenyl rings now
  • Read the rest

Jul 312010
 

CRYSTALS v14.11 is available as a beta-test.

Many small changes in Regularise Replace thanks to a CRYSTALS workshop in Toulouse organised by Carine Duhayon and Laure Vendier.

Cif generator now properly includes esds on refined hydrogen bonds, has incrreased figure-fields for cell parameters, and appends constraint and restraint information as _iucr_ data items at end Read the rest

Jun 292010
 
CRYSTALS Enhancements: Dealing with Hydrogen Atoms in Refinement (R. I. Cooper, A. L. Thompson and D. J. Watkin)

J. Appl. Cryst. (2010), 43, 1100-1107.    [ doi:10.1107/S0021889810025598 ]

Because they scatter X-rays weakly, H atoms are often abused or neglected during structure refinement. The reasons why the H atoms should be included in the refinement and some of the consequences of mistreatment are discussed along with selected real examples demonstrating some of the … Read the rest